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All meetings wil be in Castetter 107 unless otherwise specified.
Date & Time | Speaker | Title | Links |
07/03/2013 11:00 am |
Sarah Buddenborg | Next Generation Sequencing |
Slides
Handout |
07/17/2013 11:00 am |
Lijing Bu Dan Felker |
Unix Tutorial Contact Lijing Bu prior to the talk to set up an account. |
Unix Tutorial
Slides Practice commands |
07/31/2013 11:00 am |
Lijing Bu Dan Felker |
Unix Tutorial Contact Lijing Bu prior to the talk to set up an account. |
Unix Tutorial
Practice commands |
08/14/2013 11:00 am |
Dr. Darrell Dinwiddie | TBA Darrell L. Dinwiddie graduated summa cum laude from the University of New Mexico in 2003 with Bachelor of Science degrees in Biology and Psychology. In 2008, he earned a Ph.D. in Biomedical Sciences from the Department of Pathology at the University of New Mexico School of Medicine. Darrell completed postdoctoral training in virology and immunology at Lovelace Respiratory Research Institute in Albuquerque, New Mexico and in human genetics at the National Center for Genome Resources in Santa Fe, New Mexico. In 2011, he joined Children's Mercy Hospital & Clinics in Kansas City, MO as the Director of Lab Operations for the Center for Pediatric Genomic Medicine. At Children's Mercy, Darrell leads and manages the design, development and deployment of sequence production workflows and quality control systems in support of the Center's operations to develop next-generation sequencing based clinical tests. Dr. Dinwiddie is a member of the American Society of Human Genetics. |
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08/28/2013 11:00 am |
Tori Hansen | Illumina sequencing & RNA-Seq | |
09/11/2013 4:00 pm |
Everyone | Crowdsourcing your bioinformatics problems | |
09/25/2013 4:00 pm |
Sarah Buddenborg | Analyzing 454 transcriptome data. Programs demonstrated will include GMAP/GSNAP, BLAST+/BLASTall, Galaxy, and SeqClean. Please bring a computer if you have one so that you can use these analysis tools on actual 454 transcriptome data. | file 1
file 2 |
10/09/2013 4:00 pm |
Connor Cameron | An overview of assembly and assembly pipelines for transcriptomes and genomes. This will focus on establishing some background information about assembly, and then will briefly approach applications and issues for these techniques. Additionally, some information about NCGR will probably be included. | |
10/23/2013 4:00 pm |
TBA | TBA | |
11/13/2013 4:00 pm |
TBA | TBA | |
12/11/2013 4:00 pm |
TBA | TBA |